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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015882651.1_cds_XP_016438229.1_33914
CDS Infomation

[gene=LOC107764203] [db_xref=GeneID:107764203] [protein=homogentisate 1,2-dioxygenase-like isoform X2] [protein_id=XP_016438229.1] [location=complement(join(4453..4680,5234..5317,5398..5552,5698..5767,5920..6095,6178..6345,6445..6505))] [gbkey=CDS]
Sequence

ATGGAGAACTGTGCCTTCTGCAATGCCGATGGTGATTTTCTGATAGTTCCTCAACAAGGA
AGGCTGTGGATTACAACTGAATGCGGAAGATTGCAGGTTTCTCCTGGTGAAATAGTGATT
TTGCCTCAAGGATTTCGATTTTCTGTTGACCTTCCAGATGGACCTTCACGTGGTTACGTT
GCTGAAATTTTTGGAACTCATCTTCAACTTCCTGATCTGGGGCCAATAGGTGCAAATGGT
CTGGCTGCTCCGAGGGATTTTCTAGTTCCTGTTGCGTGGTATGAAGATGGCTCCCGTCCA
GGTTACGCTATTGTGCAAAAGTATGGTGGTGAACTCTTCACTGCGAAGCAAGACTTTTCT
CCTTTTAATGTGGTCGCTTGGCATGGTAACTATGTTCCTTATAAGTATGATTTAAGCAAG
TTCTGCCCTTACAATACCGTATTGATCGACCACAGTGACCCTTCAATAAATACAGTTTTG
ACAGCACCAACGGATAAACCTGGTGTGGCATTACTTGACTTTGTCATCTTTCCTCCCCGG
TGGTTGGTTGCTGAACATACCTTCCGTCCTCCATATTATCACCGCAATTGTATGAGCGAA
TTTATGGGTCTAATCACTGGTGGATATGAGGCAAAAGCTGATGGTTTTCACCCTGGCGGA
GCAAGCCTTCATAGTTGCATGACTCCTCATGGTCCTGATACCAAAACATATGAGGCAACC
ATTGCACTTGGAAATGAAGCTGGTCCACATAAAATAGCCGATACGATGGCTTTTATGTTC
GAGTCTTGTCTAATACCCCGAGTCTGTCCGTGGGCGCTTGAATCTCCATTTATGGATCAC
GATTATTACCAATGCTGGATCGGCTTGACGTCTCACTTCTCAGGACTATCCATGAAAGCA
GACAACAGCGACTTTCAGAATGGAAAACCAGTAGAAAGGTGA

Peptide Sequence

PEP ID

XP_016438229.1
PEP Infomation

PREDICTED: homogentisate 1,2-dioxygenase-like isoform X2 [Nicotiana tabacum]
Sequence

MENCAFCNADGDFLIVPQQGRLWITTECGRLQVSPGEIVILPQGFRFSVDLPDGPSRGYV
AEIFGTHLQLPDLGPIGANGLAAPRDFLVPVAWYEDGSRPGYAIVQKYGGELFTAKQDFS
PFNVVAWHGNYVPYKYDLSKFCPYNTVLIDHSDPSINTVLTAPTDKPGVALLDFVIFPPR
WLVAEHTFRPPYYHRNCMSEFMGLITGGYEAKADGFHPGGASLHSCMTPHGPDTKTYEAT
IALGNEAGPHKIADTMAFMFESCLIPRVCPWALESPFMDHDYYQCWIGLTSHFSGLSMKA
DNSDFQNGKPVER

Transcript Sequence

Gene sequence data has not been registered.